- fix tests
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@@ -59,7 +59,7 @@ fn register(fixed: &Array2<f64>, moving: &Array2<f64>) -> Result<Transform<Ix2>,
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The returned `Transform` maps coordinates from the *fixed* image to the *moving* image, i.e.
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`moving(transform_point(x)) ≈ fixed(x)`. To warp the moving image into the fixed image's frame:
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```rust
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```ignore
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let transform = register(&fixed, &moving)?;
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// out-of-range pixels are filled with the default value (0.0 by default)
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let registered = transform.interpolate_par::<3, _, _>(moving.view(), &Default::default())?; // cubic B-spline, parallel
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@@ -158,7 +158,7 @@ fn main() -> Result<(), Error> {
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Create a moving image by applying a known transform to a fixed image, register, and check that the recovered transform
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matches the inverse of the ground-truth transform (adapted from the crate's `register2_random_affine` test):
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```rust
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```no_run
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use image_registration::error::Error;
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use image_registration::julia_image;
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use image_registration::transform::Transform;
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@@ -196,9 +196,13 @@ fn main() -> Result<(), Error> {
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}
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```
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> **Note:** registration uses random point sampling on its coarser levels, so whether `sse < 1.0` holds for a given
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> image pair and transform is stochastic; this example may need a few tries (or a simpler transform, e.g. pure
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> translation) to converge. The crate's `register2_random_affine` unit test is a verified case for this path.
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### 4. Registration with inspection of every optimization step
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```rust
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```ignore
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use image_registration::error::Error;
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use image_registration::transform::Transform;
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@@ -223,7 +227,7 @@ fn main() -> Result<(), Error> {
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following uses two levels: a coarse level with strong Gaussian smoothing and the robust ASGD optimizer, then a fine
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level with L-BFGS for accuracy.
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```rust
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```ignore
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use image_registration::error::Error;
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use image_registration::metric::{SamplingArg, Sigma};
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use image_registration::register::{Optimizer, Registration, RegistrationStep};
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@@ -266,7 +270,7 @@ fn main() -> Result<(), Error> {
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Pass a `Vec<Option<f64>>` as `fixed_mu`: `None` optimizes a parameter, `Some(v)` keeps it fixed at `v`. For example,
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register for translation only:
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```rust
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```ignore
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use image_registration::error::Error;
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use image_registration::transform::Transform;
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@@ -299,6 +303,7 @@ Build a `MattesMetric` and evaluate the (negative) mutual information and its gr
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use algos::ObjectiveFunction; // direct dependency of image-registration; add it to your crate to name the trait
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use image_registration::bspline::{BSpline, BSplineTrait};
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use image_registration::error::Error;
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use image_registration::julia_image;
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use image_registration::metric::{MattesMetric, SamplingArg, Sigma};
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use image_registration::transform::Transform;
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